These new functions are still a work in progress, but by way of documentation for anyone brave enough to try, here is the gist of things.
MRS_struct = GannetLoad({'gabafile.SDAT'},{'waterfile.SDAT'});
MRS_struct = GannetFit(MRS_struct);
MRS_struct=GannetMask_Philips('gabafile.SPAR','T1.nii',MRS_struct,1);
MRS_struct = GannetSegment(MRS_struct);
MRS_struct = GannetLoad({'gabafile.SDAT'},{'waterfile.SDAT'});
MRS_struct = GannetFit(MRS_struct);
MRS_struct=GannetMask_Philips('gabafile.SPAR','T1.nii',MRS_struct,1);
MRS_struct = GannetSegment(MRS_struct);
Hi
ReplyDeleteWe've been using Gannet1 with great success and we are very keen to try GannetMask and GannetSegment. Do these functions work with GE data? Also do I need to upgrade to Gannet 2.0 or can I continue with my current version (ver 1.0 I think) which works great.
Thanks
Jim
Hi Jim,
DeleteI would encourage you to move to the latest version of Gannet as lots of things are improving with time. We expect the fucntions to work GE data, and they do for our data, but by the looks of the other comment below, there are hiccups to iron out for some systems.
Thanks for sharing the great tips with us.
ReplyDeleteImage editing solutions
many thanks for sharing G.Mask and G.Segment. Unfortunately, for GE data the code does not work (Gannet2). There are two issues (may be more): one have to create Pxxx.7.hdr - a header. This is not difficult but it would be nice to have a few words in the manual about how-to.
ReplyDeleteSecond issue, when the header file is in place the GannetMask_GE does not load the coordinates for the VOI and I think it should not if one look into the code.
Hey to everyone, it’s my first visit of the blog site; this blog includes awesome and actually best info for the visitors. Dino Gomez
ReplyDelete